CDS
Accession Number | TCMCG007C21044 |
gbkey | CDS |
Protein Id | XP_009134905.1 |
Location | join(16247542..16247701,16247773..16247986,16248064..16248159,16248244..16248361,16248443..16248616,16248704..16248874,16248963..16249018,16249111..16249200,16249285..16249436,16249533..16249615,16249696..16249824,16249912..16249980,16250073..16250241,16250713..16250849,16250937..16251023,16251137..16251337,16251490..16251682,16251825..16251922,16252011..16252154,16252249..16252405,16252621..16252754,16252846..16252924,16253003..16253165,16253273..16253348,16253465..16253635,16253732..16253800,16253874..16253978,16254076..16254165,16254358..16254575,16254680..16254887,16254966..16255148,16255278..16255373,16255458..16255525,16255608..16255965,16256077..16256292,16256380..16257036,16257117..16257526,16257615..16257846,16257952..16258122,16258219..16258449) |
Gene | LOC103859164 |
GeneID | 103859164 |
Organism | Brassica rapa |
Protein
Length | 2210aa |
Molecule type | protein |
Topology | linear |
Data_file_division | PLN |
dblink | BioProject:PRJNA249065 |
db_source | XM_009136657.3 |
Definition | uncharacterized protein At3g06530 isoform X2 [Brassica rapa] |
EGGNOG-MAPPER Annotation
Sequence
CDS: ATGAGTTCCTCGTTAGCTTCACAGCTACAAGCCATCAAGTCAATTGTACAAGCCGATACAGAGCCTTCAAAGAGACCCTACACTCGCCCTTCGATCCTCTTCAGCCCCAAAGAAGCAGCTGATTTCGACATCGAGTCAATCCACGAACTCGGACTCAAAGGTCTCGAGGTGCTTGGAAACAAAGACGAGAGGTTTAAGAACTTCGCGAACGATTTGTTTAGTCATAAGAGTAGAGAAATCGATAGAGAGCTGCTTAGTAAAGAAGAGAATGCTAAGATTGATGCGTCGATCAGCTCGTATCTACGGTTACTCTCTGGCTATCTTCAGTTTCGTGCTTCCTTGGAGACGCTTGAGTATCTCATACGAAGATACAAGGTGCATGTATATAATGTAGAAGATGTGGTGTTATGTGCTTTGCCGTATCACGATACGCATGCGTTTGTCCGTATTGTTCAGCTGATTACCACTGGAAACACCAAGTGGAAGTTTCTGGATGGTGTGAAGAACTCAGGTGCTCCACCTCCTAGAGCTGTTATCGTTCACCAGTGTATACGTGATATGAATGTATTGGAGGCCTTGTGTGACTATGGATCTCGGACCAAGAAGTATCAGCCTTCAAAACCCGTGGTCAGCTTCTCCACAGCTGTTGTCGTCGAGGTTCTAGGTTCTGTGGCCAAGGTTGATGGAGATATTGTAAAGCAGATTTTACCATTTGTGGACTCTGGTCTTCAGTCCGCTGTAAAAGGATGTTTAGATCAGCAGGCTGGTGCGTTGATGGTTGTTGGCATGTTGGCTACCAGAGCCACGCTAAATGATAACCTTATCAAACGCTTTATGAGGTCAATCATCGACATTTCTCGTGAACATGCCAAAGAGTCCTCTGATCGTCATTGGCTTCGATTGTCATTTATGGCATTGATTAATCTGGTTCAGTTGCAGTCTGTGGACTTGATCCCAAAGAAAGCTTTGGACCTTTTAAAGGAAATAAGGGATATTTCTGGTGTTCTTCTAGGCTTGTCCAAAGAGTTCAACATTAAGAGGTTCCTTGCAGTGTTACTAGATTCTCTTCTTCTTTACAGTTCGTCTGATGATCAATGTCTGGAAACTCTAGTTTCGATAATTGATAATGTTCCAGTAGACAAGTTGGTTGATCATTTGATCTCCAAGGTTTTCTCTACTTGTATGACACAATACCAGAAGAACAAAAGTGATCTTACATCTTCTACATCTGGGAGCTGGGCCAAGAAAATTCTGGCTGTTGTTAGCAAGAAGTATTCTGTTGAATTACGTGCAGCAGTACCAAAATTTATGGAGGATACTAAAGGTCAGTCGAAGAAAGAAGATTTGAAGCTGGAGATCTTGTCTCGTATGATGGATGGAAATTCAGACATTTCCACGCCGTTCATGGATTCAAAATTATGGTTCCGGCTCCACCATCCTAAGGCTGCTGTACGTTGTGCTGCGCTTTCAAGTCTAAACAGTGATCTCAAGAGTGATAGATCTAAGGCAGAGAACCTCATCACAATTCAGGATGCTATAGTGCGCCAGCTTTGGGATGATGACCTGGCTGTTGTTCAAGCCGCCCTGTCTATTGATCAGTTGCCCAATATTGTAACCAGTTCTAGTCTTCTGGATGCTTTGCTTCATTTGGTGAAACGGTGTGTTGGGATTCTCCTATCAGGATCACAAAATGTTCAACTTGCAGCAGATGTCGTTGCTCTGTCCCTTAAAATTGCTGTCTCAAGTTTCTGTAATCAAGCAGACTCTACCGAGAAAGTCGCCTCTGCAGTGTTCCCATTTCTCTTAATTCAGCCTAAGAGTTGGAATTTAAATCTACATGTGCTGACATTGGTGAAGGATGTTAGCTGGCCACTTATCAAGAATCTTGTTGCTGATGACGGAATGAAAAATCTCCCAGATATCATGTCTGGAAATATATCCTCGATAAGCATGGATATCATCAATATTTTGGGGGAAGCACTTTCCTTGGAACCTGATGAGCGTAGGATTGAGCTAATTGAGAGTGCTTGCAACTTTAAGCTTTCTGAAGTTTTGGAAGCATGCAGCAATATCAAATTGACAGAACAGGAACTCAACAAGTTGCAGAAGGGACTGTTGATCCGTGAAAGTGTGTCCGCATTGAACATGAATATCGTTGACCAGCTGGCGGAAGCATTTCTGATGCACCCTGGTGACATTATTCAGTGGCTTAATAACAGTTGCCAAGATGCACCGTTGTCAAAGACGCTGTTTTACCTTTTGTTGATGCAGTCGTTGCACAAGATGAATTCTTCATCTGATCCGAGTCACTTTTTGGATCTTGTCGACCTTTGCTTTCCTGTTCTGAAGACCGAGTGGCAAGATCTTGATGTTGCAGTTGATGTGTCTTTTAAAGAGCTGTCCAAAAGCAACTGCCGCGAACTCTTATATCAACTTTGTGACACCTATGATGTCACTGCACTGAATTCAAAGCTTCTACTCTGCTTGTTTTGGAAATTGGTCGACTCATTCGTTAAACTTGAACCGGCCCATGTCTCTTCGGTTTTTAGCAAAAGGTTGTGTAGCGGACTTGAAGATTTGTTTTTCTTTTTTGCAACAACCCGATCACAGCATGTTTTCAAGGAACACCTCCACTACCGTGTGAGAGAAGCCAAAGTCTGTCCCGTTTTGTTTCTCACTCGACTCCTATCACGAGAAGATGTTCCTCCTATGGTCCAAATTGAAAGTCTAAAATGCTTCTCGTATCTTTGCTCCACTGGAAATAGTGAATGGTCGATTCAGATTTTCTCTAGTTTTCCAGTACTTTTGGTTGCCATGTCGAGTGATAATCAGGACGTTAAAGTAGCTGCCATGAATTGCTTAGAGGCGTTCTTCAACCTATGGTGCCGTGTTGACTCTAGCAAGAAAAATGGGAGTGCTGCAATCTATAGTAGTTCCTTTGATGAACTTTTGGGAATGATCATTCAACAAAGGAGGCTTATATTGTCGGACAATAAGTTTCTCTCATCGTACTTGACATCGTTGCTCAGTTCAACCCCTAATGACTTGCTAGTGCCAGTTGACCTGCAAAAGAGGTTTGATCAATCCACAAAAGAAAGCGTTCTTTCATTCATCTTATTGTATGCGCAAGAACTTCCTGCTTATGGGAAGCTAAAACTTCTATCACTGCTAAAAGGTCTGGGCATCTTGCTTATGCATGATGAAAATGTTAAGTCATTAGCACAACTTCTAGATAAACGTAGTCAGTACTATGTTAAACTGGACAAAACTTCCCCGCCAATATCAGAAACTGAGGTCGACTTATTGTGCCTTCTCCTGGAGTGCTCCATGATGCGTTCATCATTGTTTAAAGGGCAGTCTCTTGACGATCACATAATGAAGGCATTGAAAATGGATTATGGGGATTCAGAAAATCCTGCGGTTATCTCTCCATGTATTACTATTTTGGAGAAGTTAACCAATCAATATTTTACTGAACTGAAGACTGAGGTTCAGATTCGTTTCTTCAACAAGCTAGTGTCTATGTTTCGAAGTACAAATGGCAGGATACAAAATGCTGCTAAAGAAGCTGTCTTACGCCTGAAGATTTCTTGTTCAACGGTGGTCCATACACTCGATCATATCACTCAGCAGAATAATCTTGTTATTGATTCTTTGAGCAAGAAGAAGAAACCGAAGAAAAATTCAGAGTCCTGCCTAGACGAGGACGTAAATGGTGGGGAACTTCTAAGAGGAGAAAAGGCTCTCTCTTTCATTGCCTCGTTAGTTGACATGCTGCTTCTAAAGAAAGATCTAGTTCACAGGGAGTCCCTTGTAGGGCCTTTGTTTAAGCTCCTAGGACGATCTATGTCTAATGAATGGGTGAATATTGCTTCGTCGGCTGAAGAAACCTCCGTCCAACCTCCTCAGGACGTCCGTGAAATAACTCAGGCATCTATTTCTTCCATCCAACAGACAGTGCTCTTACTCCTCAAAGATATTTTTGATTCTCCGAATATGAATCCTTTGAAGGCTGACATAACAAGTGAAATCAATGTCAAAATGCTGGTTGAGTTTGCCCATTCCTCAAATGATGGAGTCACACGGAACTATATCTTCTCCCTCTTCACATCAATAATTAAAATTGTTCCAGATAGAGTTTTGGACCATATTATCAGCATACTTACACTTGTTGGAGAATCAACGGTGACACAGATTGATAGCCACTCCAAGTCGATCTTTGAGGAGTTTATATCATCAGTTATTCCATTTTGGCTGTCTAAGACTAAGAGTGAGGAGAAGTTGCTGGAGATTTTTGTTAAAGTGTTGCCTGATATTGTTAAGCATAGAAGGCGCTCCATTGTAGCTTACCTGCTGAGAGTTATTGGTGAACAAAATGGCTTGCCTTCTTTACTTGTCCTCTTGTTCCAGTCCCTGATTTCAAGGAAAGACTCAGCTTGGCTTGGTAAAGTCCAGACTTCAGAAAGTTTCTTATCCGATGTTAAGAGGGAATGGGAGTATGCTTTTGCCGTGGAAATATGCGAACAATATACTTCTTCAACATGGCTCTCTTCCCTGGTCATGCTTCTTCAGACTATCAGCAAAGACAGTTCTAGTAAAGAATGTTTTTTTCAGATGCGACTTGTCCTAGAATTTATATTCCAGAAATTGCAAGACCCAGAATTTGCATTTGCAGTGTCACTTGAACCAAGAAATAATGTTTCAGTTGGCATTCAGCAAAAACTACAGGAACTTATGAAGGGTTGTATACTTCTCCTGCAAGCTGTTGATTCCACGAAGGAGAAAGATGTGACTTCTCTGGTTAGAAAGGAAATCAGAATGCGTGTACATGATATCTTGATGACTGTTACGGGAGTTATGGATCTGTCTATATATTTCAGAGTTGTTACTAGCTTGCTTCAACAGCAGTCGGATCGTAATGGGACGAGAAAGGTACTTGGCCTTATAAGTGCAAGAGCTAAGGACTCTTCTTCTTCTAAACTGAAACAAAAGAGGAGGCTTTCCAATCAGAAAAGAGGAAATCCTTGGTTGAACCTGGATGAGGCTGCTGTTGAAGCTTTCGGGAAGATGTGTGAGGAAATCGTCAATGTGATTGTTGAGACAGATGATGAGTCAGGTGTCCCAGCTAAACGAGCTGCCATTTCTACGCTAGAAGTTTTGGCTAGCAGGCTTCCCTCTGATCATCAGATCTTCAGCAGGTGTCTTGCATCTGTTGCAGAAGGCATCAGCTCAAAGAATCTGGGAGTTTCTTCAAGCTGTCTTCGTACAACTGGTGCCTTGATCAATGTTCTTGGACCAAAGGCGCTCGTTGAACTTCCACGCATAATGAAAAATTTGGTACAACAATCTCGCGAAGTGTCATCTGCATCAACAACAACTGGAAGCGCAACAGCTGACGAACAGTTGGTTATGCTGTCTGTTCTAGTCACTTTGGAAGCAGTGATTGATAAACTTGGAGGCTTCCTGAATCCTCATCTTGGGGATATCATCAGACTCATGGTTCTGCATCCTGAATATGTCTCTGACTTCGACAAGAACCTCAAGTCCAAAGCCAATGCCATAAGGAGACTCCTCACTGAAAAAATACCAGTTCGCCTCACTCTGCAACCTCTTCTGCGAATATACGATGAAGCTGTTACTTCTGGAGATGCAAGTTTGGTGATTGCTTTTGACATGCTAGAAAACCTGGTTGCAAAAATGGATAGAGCATCTGTTGTTTGCAACCATGCAAAGATTTTCGACCAATGCTTAGTTGCCCTAGATATCCGACGCCAAAATCCAGCAACGATTCAGAACGTTGATGATGCGGAGAGAAGTGTAATCAGTGCGACGGTTACACTCACAAAGAAGCTGACTGAGTCTGAGTTCAAACCCCTCTTTATCAGAAGTATTGATTGGGCAGAGTCAGATATTGTAGATGGATCTGGGAATGAGAACAAGAGCGTGGACAGATCCATCTCTTTCTATAGTCTAGTGAATAGGCTCTGTGAGAGTCACATGTCGATCTTTGTACCATACTTCAAGTTCATGCTTGATAGTATTGTATCGCATCTCACTAGTGCCGGAGCATCAGTTTCAACAAGGAAGAAAAAGAAAGCCAAGATTCAGGAAACGGTTGACACTATACCACCAAAGAGCTGGCATCTTAGGGCGTTGGTGCTTTCTTCTCTAAATAACTGCTTTTTGCATGATACTGGAAGCTTGAAGTTCCTCGACGCAAATAACTTCCAGGTGCTACTGAAGCCTATAGTATCTCAGCTTGTTGTTGAACCGCCATCTGATTTAAAGGAGCATCCACGTCTACCATCTGTAGAAGAGATTGATGAGTTGGTGGTTTTATGTATTGGTCAGATGGGTGTGGCATCTGGCTCTGATCTTCTCTGGAAACCGTTGAACCACGAGGTGCTAATGCAAACAAGGAGTGAGAAGTTGCGTGCGAGGATGTTGAGTTTGAGGAGTGTGAAACAGTTGATGGATAATCTGAAAGAAGAGTATCTTGTATTGCTAGCTGAGACTATTCCTTTCTTAGGTGAACTACTAGAAGACGTTGATCTTTCTGTCAAGTCTTTGTCTCAAGATATCATCGCAAAGCTGGAAGAGATGAGTGGTGAAGATCTGGCGCAACACCTATGA |
Protein: MSSSLASQLQAIKSIVQADTEPSKRPYTRPSILFSPKEAADFDIESIHELGLKGLEVLGNKDERFKNFANDLFSHKSREIDRELLSKEENAKIDASISSYLRLLSGYLQFRASLETLEYLIRRYKVHVYNVEDVVLCALPYHDTHAFVRIVQLITTGNTKWKFLDGVKNSGAPPPRAVIVHQCIRDMNVLEALCDYGSRTKKYQPSKPVVSFSTAVVVEVLGSVAKVDGDIVKQILPFVDSGLQSAVKGCLDQQAGALMVVGMLATRATLNDNLIKRFMRSIIDISREHAKESSDRHWLRLSFMALINLVQLQSVDLIPKKALDLLKEIRDISGVLLGLSKEFNIKRFLAVLLDSLLLYSSSDDQCLETLVSIIDNVPVDKLVDHLISKVFSTCMTQYQKNKSDLTSSTSGSWAKKILAVVSKKYSVELRAAVPKFMEDTKGQSKKEDLKLEILSRMMDGNSDISTPFMDSKLWFRLHHPKAAVRCAALSSLNSDLKSDRSKAENLITIQDAIVRQLWDDDLAVVQAALSIDQLPNIVTSSSLLDALLHLVKRCVGILLSGSQNVQLAADVVALSLKIAVSSFCNQADSTEKVASAVFPFLLIQPKSWNLNLHVLTLVKDVSWPLIKNLVADDGMKNLPDIMSGNISSISMDIINILGEALSLEPDERRIELIESACNFKLSEVLEACSNIKLTEQELNKLQKGLLIRESVSALNMNIVDQLAEAFLMHPGDIIQWLNNSCQDAPLSKTLFYLLLMQSLHKMNSSSDPSHFLDLVDLCFPVLKTEWQDLDVAVDVSFKELSKSNCRELLYQLCDTYDVTALNSKLLLCLFWKLVDSFVKLEPAHVSSVFSKRLCSGLEDLFFFFATTRSQHVFKEHLHYRVREAKVCPVLFLTRLLSREDVPPMVQIESLKCFSYLCSTGNSEWSIQIFSSFPVLLVAMSSDNQDVKVAAMNCLEAFFNLWCRVDSSKKNGSAAIYSSSFDELLGMIIQQRRLILSDNKFLSSYLTSLLSSTPNDLLVPVDLQKRFDQSTKESVLSFILLYAQELPAYGKLKLLSLLKGLGILLMHDENVKSLAQLLDKRSQYYVKLDKTSPPISETEVDLLCLLLECSMMRSSLFKGQSLDDHIMKALKMDYGDSENPAVISPCITILEKLTNQYFTELKTEVQIRFFNKLVSMFRSTNGRIQNAAKEAVLRLKISCSTVVHTLDHITQQNNLVIDSLSKKKKPKKNSESCLDEDVNGGELLRGEKALSFIASLVDMLLLKKDLVHRESLVGPLFKLLGRSMSNEWVNIASSAEETSVQPPQDVREITQASISSIQQTVLLLLKDIFDSPNMNPLKADITSEINVKMLVEFAHSSNDGVTRNYIFSLFTSIIKIVPDRVLDHIISILTLVGESTVTQIDSHSKSIFEEFISSVIPFWLSKTKSEEKLLEIFVKVLPDIVKHRRRSIVAYLLRVIGEQNGLPSLLVLLFQSLISRKDSAWLGKVQTSESFLSDVKREWEYAFAVEICEQYTSSTWLSSLVMLLQTISKDSSSKECFFQMRLVLEFIFQKLQDPEFAFAVSLEPRNNVSVGIQQKLQELMKGCILLLQAVDSTKEKDVTSLVRKEIRMRVHDILMTVTGVMDLSIYFRVVTSLLQQQSDRNGTRKVLGLISARAKDSSSSKLKQKRRLSNQKRGNPWLNLDEAAVEAFGKMCEEIVNVIVETDDESGVPAKRAAISTLEVLASRLPSDHQIFSRCLASVAEGISSKNLGVSSSCLRTTGALINVLGPKALVELPRIMKNLVQQSREVSSASTTTGSATADEQLVMLSVLVTLEAVIDKLGGFLNPHLGDIIRLMVLHPEYVSDFDKNLKSKANAIRRLLTEKIPVRLTLQPLLRIYDEAVTSGDASLVIAFDMLENLVAKMDRASVVCNHAKIFDQCLVALDIRRQNPATIQNVDDAERSVISATVTLTKKLTESEFKPLFIRSIDWAESDIVDGSGNENKSVDRSISFYSLVNRLCESHMSIFVPYFKFMLDSIVSHLTSAGASVSTRKKKKAKIQETVDTIPPKSWHLRALVLSSLNNCFLHDTGSLKFLDANNFQVLLKPIVSQLVVEPPSDLKEHPRLPSVEEIDELVVLCIGQMGVASGSDLLWKPLNHEVLMQTRSEKLRARMLSLRSVKQLMDNLKEEYLVLLAETIPFLGELLEDVDLSVKSLSQDIIAKLEEMSGEDLAQHL |